C9orf72 hexanucleotide repeat expansions impair microglial response in models of ALS - Astrocytes

Cell information vs gene expression on reduced dimensions

In this tab, users can visualise both cell information and gene expression side-by-side on low-dimensional representions.

Cell information





Gene expression


Cell information





Gene expression

Cell information / gene expression box plot / violin plot

In this tab, users can visualise the gene expression or continuous cell information (e.g. Number of UMIs / module score) across groups of cells (e.g. libary / clusters).
Y-axis is on a log10 scale.
The black dot inside the violin plots is the median.







This webpage was made by Tim Meese adapting and using the code of ShinyCell